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Irresistible Moist Apple Cinnamon Muffins for Fall
Apple Cinnamon Muffins are the perfect fall treat that combines the warmth of cinnamon with the natural sweetness of fresh apples. These muffins strike the perfect balance between moist, fluffy texture and rich, comforting flavor. With their irresistible crumb topping and optional sweet glaze, these homemade treats will fill your kitchen with the most delightful aroma that signals autumn has arrived.
Why You'll Love This Recipe
- These muffins stay incredibly moist for days thanks to the perfect ratio of yogurt and butter in the batter
- The chunky apple pieces create pockets of juicy fruit throughout each muffin, giving you bursts of flavor in every bite
- The cinnamon crumb topping adds a delightful crunch and extra layer of warm spice that elevates these from ordinary to extraordinary
- They’re incredibly versatile – perfect for breakfast on-the-go, afternoon snacks, or even dessert when served warm with a scoop of vanilla ice cream
- The recipe is forgiving and adaptable, making it perfect for bakers of all skill levels, even if you’re just starting your baking journey
Why These Apple Cinnamon Muffins Work
What makes these apple cinnamon muffins stand out from other recipes is the careful balance of ingredients. The combination of brown sugar and granulated sugar creates the perfect sweetness while the brown sugar adds moisture and a hint of molasses flavor.
The baking technique is another game-changer. Starting with a higher temperature (425°F) helps the muffins rise quickly, creating that beautiful domed top we all love. Then reducing to 350°F ensures the inside cooks perfectly without burning the tops.
Using both baking powder and baking soda provides the ideal lift, while the yogurt (or sour cream) adds tenderness and moisture that lasts for days. The chunks of fresh apple distribute evenly throughout the batter, ensuring every bite contains that perfect apple flavor.
The crumb topping isn’t an afterthought—it’s an essential component that adds texture contrast and concentrates the cinnamon flavor on top. For those with a sweet tooth, the optional vanilla glaze adds another dimension of sweetness that complements the spiced muffin perfectly.
What You’ll Need for Perfect Apple Cinnamon Muffins
Ingredients
For the crumb topping:
- 1/3 cup (67g) packed light or dark brown sugar
- 1 Tablespoon (15g) granulated sugar
- 1 teaspoon ground cinnamon
- 1/4 cup (4 Tbsp; 56g) unsalted butter, melted
- 2/3 cup (84g) all-purpose flour (spooned & leveled)
For the muffins:
- 1 and 3/4 cups (219g) all-purpose flour (spooned & leveled)
- 1 teaspoon baking soda
- 1 teaspoon baking powder
- 1/2 teaspoon salt
- 1/2 cup (8 Tbsp; 113g) unsalted butter, softened to room temperature
- 1/2 cup (100g) packed light or dark brown sugar
- 1/4 cup (50g) granulated sugar
- 2 large eggs, at room temperature
- 1/2 cup (120g) yogurt or sour cream, at room temperature
- 2 teaspoons pure vanilla extract
- 1/4 cup (60ml) milk (any kind), at room temperature
- 1 and 1/2 cups (180g) peeled & chopped apples (1/2-inch chunks; about 2 medium apples)
For the optional glaze:
- 1 cup (120g) confectioners’ sugar
- 3 Tablespoons (45ml) heavy cream (or milk for a thinner consistency)
- 1/2 teaspoon pure vanilla extract
Tools
- 12-count muffin pan
- Cupcake liners (optional but recommended)
- Mixing bowls (large and medium)
- Hand mixer or stand mixer with paddle attachment
- Measuring cups and spoons
- Whisk
- Rubber spatula
- Wire cooling rack
- Apple peeler and knife
- Toothpicks (for testing doneness)
How to Make Irresistible Moist Apple Cinnamon Muffins
- Preheat your oven to 425°F (218°C). Prepare your muffin pan by spraying with nonstick spray or lining with cupcake liners. This recipe makes about 14 muffins, so you might need a second pan or plan to bake in batches.
- For the crumb topping: In a medium bowl, mix together the brown sugar, granulated sugar, and cinnamon. Pour in the melted butter and stir. Gently incorporate the flour using a fork, keeping the mixture as large crumbles. Be careful not to overmix, or it will become paste-like. Set aside.
- For the muffin batter: In a large bowl, whisk together the flour, baking soda, baking powder, and salt. Set aside.
- In another bowl, beat the softened butter with both sugars on high speed until creamy (about 2 minutes). Add the eggs, yogurt, and vanilla extract, beating on medium speed for 1 minute, then high speed until mostly combined. It’s okay if the mixture looks slightly curdled.
- With the mixer on low speed, gradually add the dry ingredients and milk to the wet ingredients. Mix just until no flour pockets remain. Gently fold in the chopped apples with a spatula.
- Divide the batter evenly among the muffin cups, filling each all the way to the top. Sprinkle the crumb topping generously on each muffin, gently pressing it down so it adheres.
- Bake at 425°F for 5 minutes, then—without opening the oven door—reduce the temperature to 350°F (177°C). Continue baking for 15-18 minutes more, or until a toothpick inserted in the center comes out clean. Total baking time is about 20-23 minutes.
- Allow the muffins to cool in the pan for 5 minutes before transferring to a wire rack to finish cooling.
- For the optional glaze: Whisk together the confectioners’ sugar, heavy cream, and vanilla until smooth. Drizzle over the muffins while they’re still warm or after they’ve cooled completely.
Chef's Helpful Tips
- Room temperature ingredients are crucial for proper mixing – set out your eggs, yogurt, and milk about 30 minutes before starting for the best results
- For the apples, firm varieties like Honeycrisp, Granny Smith, or Braeburn work best as they hold their shape during baking and provide a nice texture contrast
- When making the crumb topping, use a fork rather than a spoon or whisk to maintain those desirable large crumbles that create the perfect texture
- The initial high-temperature bake (425°F) is key to creating that beautiful domed muffin top, so don’t skip this step or open the oven when reducing the temperature
- Measure your flour correctly by spooning it into the measuring cup and leveling off with a knife – scooping directly with the measuring cup compacts the flour and can make your muffins dense
Serving and Storage Tips for Apple Cinnamon Muffins
These apple cinnamon muffins are incredibly versatile when it comes to serving. They’re delicious warm from the oven, at room temperature, or even chilled from the refrigerator. Each temperature brings out different aspects of their flavor profile.
To store these muffins, place them in an airtight container once they’ve completely cooled. They’ll stay fresh at room temperature for up to 3 days. For longer storage, refrigerate them for up to a week. The moisture from the apples and yogurt helps them maintain their softness even after several days.
These muffins also freeze beautifully. Wrap each muffin individually in plastic wrap, then place in a freezer-safe bag. They’ll keep for up to 3 months. Thaw overnight in the refrigerator or quickly in the microwave (about 30 seconds) when you’re ready to enjoy them.
Serving Tips
- For breakfast, warm a muffin slightly and serve with a pat of butter that melts into all the nooks and crannies
- Create a simple dessert by warming a muffin and topping it with a scoop of vanilla ice cream and a drizzle of caramel sauce
- Pack them in lunchboxes for a sweet treat that’s not too indulgent
- Serve alongside a hearty chicken casserole for a complete fall dinner with dessert built in
- For brunch, arrange on a platter with other breakfast items like fresh fruit and yogurt
Mistakes to Avoid while making Apple Cinnamon Muffins
Even experienced bakers can run into trouble with muffins. Here are some common pitfalls to avoid:
Overmixing the batter is perhaps the most common mistake. Once you add the dry ingredients, mix just until combined. Overmixing develops the gluten in the flour, resulting in tough, dense muffins instead of tender ones.
Using cold ingredients can cause uneven mixing and baking. Make sure your eggs, yogurt, milk, and butter are at room temperature before starting. This allows them to incorporate properly and creates a smoother batter.
Chopping the apples too small will cause them to disappear into the batter during baking. Aim for 1/2-inch chunks so you get those delicious pockets of apple in each bite.
Opening the oven door during baking, especially during the temperature change, can cause your muffins to collapse. Trust the timing and use the oven light to check progress if needed.
Underbaking is another common issue. Make sure to test with a toothpick in the center of a muffin (not the apple pieces) to ensure they’re fully baked. The toothpick should come out clean or with a few moist crumbs.
You Must Know
- The temperature shift from 425°F to 350°F is non-negotiable – it’s what creates the perfect rise and texture, so don’t skip this step or try to bake at a single temperature throughout
- These muffins need to cool in the pan for exactly 5 minutes – any less and they might fall apart, any more and they could become soggy from condensation trapped in the pan
- If your crumb topping looks too wet and paste-like, add a tablespoon of flour at a time until it reaches a crumbly consistency that you can sprinkle over the batter
- The muffin batter should be thick enough to scoop but not so thick it resembles dough – if it’s too thick, add a tablespoon of milk; if too thin, add a tablespoon of flour
Suggestions for Apple Cinnamon Muffins Variations
One of the best things about this recipe is how adaptable it is. Here are some delicious variations to try:
Add nuts: Fold in 1/2 cup of chopped walnuts or pecans to the batter for added crunch and nutty flavor. You can also add some to the crumb topping.
Incorporate other fruits: Mix in 1/2 cup of fresh or dried cranberries for a tart contrast to the sweet apples. Pears also work well as a partial or complete substitute for the apples.
Spice it up: Add 1/4 teaspoon of nutmeg, cardamom, or allspice to the batter for a more complex flavor profile. For a real fall treat, add a pinch of cloves and ginger to create an apple pie spice blend effect.
Make it healthier: Substitute half the all-purpose flour with whole wheat flour for added fiber. You can also reduce the sugar by 25% if you prefer a less sweet muffin. Try using Greek yogurt for extra protein.
Change the topping: Instead of the crumb topping, try a streusel with oats, or simply sprinkle the tops with cinnamon sugar before baking. For a keto-friendly option, adapt the topping with almond flour and a keto-approved sweetener.
Check out this Easy Apple Cinnamon Muffins Recipe for another take on this classic treat, or try this Quick and Easy Apple Muffins Recipe for a simplified version.
FAQs:
Firm, slightly tart apples work best in these muffins. Honeycrisp, Granny Smith, Braeburn, Pink Lady, and Jonagold are excellent choices as they hold their shape during baking and offer a nice flavor contrast to the sweet batter. Avoid softer varieties like Red Delicious, which can become mushy when baked.
Absolutely! These muffins actually taste better the day after baking as the flavors have time to meld. You can make them up to 3 days in advance and store at room temperature in an airtight container. For longer storage, freeze them for up to 3 months. Just thaw overnight in the refrigerator or microwave individual muffins for about 30 seconds when ready to serve.
To make these muffins gluten-free, substitute the all-purpose flour with a 1:1 gluten-free baking flour blend that contains xanthan gum. Bob’s Red Mill and King Arthur both make excellent options that work well in this recipe. Make sure all other ingredients, including the baking powder and vanilla extract, are certified gluten-free as well.
This typically happens when the crumb topping is too heavy or the muffin batter is too thin. Make sure your crumb mixture has enough flour to create a dry, crumbly texture rather than a wet paste. Also, ensure your muffin batter is thick enough to support the topping. If the batter seems thin, add an extra tablespoon or two of flour before topping with the crumb mixture.
While you can substitute some of the butter or yogurt with applesauce for moisture, I don’t recommend replacing the chopped apples entirely. The fresh apple chunks create pockets of fruit that give these muffins their signature texture and bursts of apple flavor. If you do use applesauce, reduce it to 1/4 cup and still include at least 3/4 cup of chopped fresh apples for the best results.
Conclusion: Why You’ll Love These Apple Cinnamon Muffins
These irresistible moist apple cinnamon muffins truly capture the essence of fall baking. With their perfect balance of warm spices, sweet apple chunks, and buttery crumb topping, they’re bound to become a staple in your recipe collection.
What makes these muffins special is their versatility – they’re equally at home alongside your morning coffee, packed in a lunchbox, or served as a cozy dessert with a scoop of vanilla ice cream. The combination of yogurt in the batter and fresh apple chunks ensures they stay moist for days (though they rarely last that long!).
The next time you’re craving something warm, comforting, and filled with fall flavors, give these apple cinnamon muffins a try. They’re simple enough for beginning bakers but impressive enough to serve to guests. For more delicious recipes that celebrate seasonal ingredients, check out our Creamy Garlic Shrimp Pasta for another crowd-pleasing option.
Whether you’re apple picking and need a recipe for your harvest, or simply want to fill your home with the irresistible aroma of cinnamon and baked apples, these muffins are the perfect answer. Happy baking!
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📖 Recipe Card

Moist Apple Cinnamon Muffins with Crumb Topping
- Total Time: 43 minutes
- Yield: 14 muffins 1x
Description
These Apple Cinnamon Muffins are bursting with chunks of sweet-tart apples, infused with warm cinnamon, and topped with a buttery crumb streusel. Moist, fluffy, and filled with cozy fall flavors, they’re perfect for breakfast, dessert, or anytime snacking.
Ingredients
- 1/3 cup packed light or dark brown sugar
- 1 Tablespoon granulated sugar
- 1 teaspoon ground cinnamon
- 1/4 cup unsalted butter, melted
- 2/3 cup all-purpose flour
- 1 and 3/4 cups all-purpose flour
- 1 teaspoon baking soda
- 1 teaspoon baking powder
- 1/2 teaspoon salt
- 1/2 cup unsalted butter, softened
- 1/2 cup packed brown sugar
- 1/4 cup granulated sugar
- 2 large eggs
- 1/2 cup yogurt or sour cream
- 2 teaspoons vanilla extract
- 1/4 cup milk
- 1 and 1/2 cups peeled and chopped apples (about 2 medium apples)
Instructions
- Preheat oven to 425°F. Grease or line a muffin pan.
- Prepare crumb topping: mix sugars and cinnamon, stir in butter, then flour with a fork to form crumbles.
- Mix flour, baking soda, baking powder, and salt.
- In another bowl, beat butter and sugars until creamy. Add eggs, yogurt, vanilla, then mix.
- Gradually add dry mix and milk. Fold in chopped apples.
- Divide batter into muffin cups and top with crumb topping.
- Bake 5 minutes at 425°F, then reduce to 350°F and bake 15–18 more minutes.
- Cool 5 minutes in the pan, then transfer to a rack. Add glaze if desired.
Notes
- Use firm apples like Honeycrisp or Granny Smith for best texture.
- Don’t skip the high-heat baking start—it ensures tall muffin tops.
- The batter should be thick but scoopable. Adjust with milk/flour if needed.
- Prep Time: 20 minutes
- Cook Time: 23 minutes
- Category: Muffins, Breakfast, Dessert
- Method: Baking
- Cuisine: American
Nutrition
- Serving Size: 1 muffin
- Calories: ~245
- Sugar: ~18g
- Sodium: ~220mg
- Fat: ~11g
- Saturated Fat: ~6g
- Unsaturated Fat: ~4g
- Trans Fat: 0g
- Carbohydrates: ~33g
- Fiber: ~1g
- Protein: ~3g
- Cholesterol: ~45mg
Keywords: fall muffins, apple muffins, cinnamon muffins, crumb topping, yogurt muffins, sour cream muffins, fall baking, easy muffin recipe